C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447844 RPL10P1-001 ENSG00000217026 9606 - 21:27420380-27421023 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000447844
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000447844 0.701±0.00 0.435±0.00 0.069±0.00 0.295±0.00 0.388±0.00 0.111±0.00 0.357±0.00 0.226±0.00 0.459±0.00 0.853±0.00 0.226±0.08 0.134±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QT CIL_0001QT_0001 CGP 21:26917912-28885371

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 702
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 702
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 702
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 702
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 675
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 658
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 588
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 523
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 462
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 435
ENSMUST00000121144 Gm11450-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000117855 Gm16128-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 2e-37 159

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