| Transcript ID | Colon |
|---|---|
| ENST00000448303 | 22.276±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RNA binding motif protein 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000448303  |
RBM39-035 |
ENSG00000131051 |
9606 | - |
20:35704703-35729344  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000WY | CIL_0000WY_0001 | CGP | 20:35699272-35742312 |
| CIL_0000X2 | CIL_0000X2_0001 | CGP | 20:35703609-35950381 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003723 | IEA | RNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000148794
|
Rbm39-019 | protein_coding | Mus_musculus | 0 | 1352 |
|
ENSMUST00000153514
|
Rbm39-025 | nonsense_mediated_decay | Mus_musculus | 0 | 837 |
|
ENSMUST00000155837
|
Rbm39-002 | nonsense_mediated_decay | Mus_musculus | 0 | 837 |
|
ENSMUST00000109587
|
Rbm39-001 | protein_coding | Mus_musculus | 0 | 837 |
|
ENSMUST00000029149
|
Rbm39-018 | protein_coding | Mus_musculus | 0 | 721 |
|
ENSMUST00000146297
|
Rbm39-003 | protein_coding | Mus_musculus | 0 | 721 |
|
ENSMUST00000126992
|
Rbm39-020 | protein_coding | Mus_musculus | 0 | 638 |
|
ENSMUST00000142071
|
Rbm39-026 | nonsense_mediated_decay | Mus_musculus | 0 | 638 |
|
ENSMUST00000119414
|
Gm15575-001 | processed_pseudogene | Mus_musculus | 0 | 595 |
|
ENSMUST00000135274
|
Rbm39-017 | retained_intron | Mus_musculus | 0 | 590 |
|
ENSMUST00000182280
|
Gm8816-001 | processed_pseudogene | Mus_musculus | 0 | 431 |
|
ENSMUST00000131625
|
Rbm39-016 | processed_transcript | Mus_musculus | 0 | 305 |
