C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sin3A-associated protein, 18kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450573 SAP18-008 ENSG00000150459 9606 + 13:21140774-21147319 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000450573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000450573 53.848±0.00 68.002±0.00 25.765±0.00 35.540±0.00 46.465±10.08 74.461±41.05 42.600±14.78 46.672±28.19 42.620±4.21 47.921±16.98 54.052±25.30 75.467±27.15 46.481±2.68 87.451±20.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SR CIL_0003SR_0001 CGP 13:20973032-21149084
CIL_0003SS CIL_0003SS_0001 CGP 13:21140514-21176602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143600 Sap18-005 protein_coding Mus_musculus 0 466
ENSMUST00000128764 Sap18-001 protein_coding Mus_musculus 0 464
ENSMUST00000074053 Gm10094-201 protein_coding Mus_musculus 0 464
ENSMUST00000119198 Gm12219-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000111268 Sap18-003 protein_coding Mus_musculus 0 337
ENSMUST00000111267 Sap18-002 protein_coding Mus_musculus 0 335
ENSMUST00000111269 Sap18-006 protein_coding Mus_musculus 4e-29 132
ENSMUST00000131455 Sap18-004 retained_intron Mus_musculus 4e-29 132

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