C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451469 EEF1A1P24-001 ENSG00000223668 9606 + 3:39358545-39359922 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000451469
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000451469 0.658±0.00 0.726±0.00 0.228±0.00 0.658±0.00 0.707±0.00 0.051±0.00 0.441±0.00 0.042±0.00 0.301±0.00 0.181±0.00 0.138±0.04 0.042±0.01 0.305±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000140 CIL_000140_0001 CGP 3:39329706-39397351

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1585
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1502
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1476
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1404
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1354
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1304
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1271
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 944
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 922
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 915
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 795
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 691
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 630
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 553
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 442
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 409

Loading