C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451562 PPIA-006 ENSG00000196262 9606 + 7:44796680-44800011 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartOvaryENST00000451562
Transcript ID Bladder Breast Heart Ovary
ENST00000451562 17.702±0.00 39.884±0.00 4.605±0.00 59.906±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SC CIL_0000SC_0001 CGP 7:44748581-44824564
CIL_0000SB CIL_0000SB_0001 CGP 7:44796680-44848083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0006457 IEA protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 529
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 505
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 499
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 470
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 462
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 460
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 448
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 436
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 392
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 342
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 331
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 270
ENSMUST00000185012 Gm12728-003 protein_coding Mus_musculus 0 270
ENSMUST00000184254 Gm12728-002 protein_coding Mus_musculus 0 270
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 7e-32 141

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