C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | regulatory factor X, 3 (influences HLA class II expression) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000451859  |
RFX3-002 |
ENSG00000080298 |
9606 | - |
9:3301543-3489428  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000NH | CIL_0000NH_0001 | CGP | 9:2720469-3526004 |
| CIL_0009AI | CIL_0009AI_0001 | VISTA | 9:3101031-3702562 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000165566
|
Rfx3-201 | protein_coding | Mus_musculus | 0 | 808 |
|
ENSMUST00000172907
|
Rfx3-004 | protein_coding | Mus_musculus | 0 | 808 |
|
ENSMUST00000174850
|
Rfx3-001 | protein_coding | Mus_musculus | 0 | 808 |
|
ENSMUST00000173863
|
Rfx3-005 | nonsense_mediated_decay | Mus_musculus | 0 | 793 |
|
ENSMUST00000173161
|
Rfx3-002 | retained_intron | Mus_musculus | 0 | 671 |
|
ENSMUST00000046898
|
Rfx3-003 | protein_coding | Mus_musculus | 0 | 671 |
