C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heat shock 60kDa protein 1 (chaperonin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452200 HSPD1-006 ENSG00000144381 9606 - 2:197494194-197500221 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X7 CIL_0007X7_0001 VISTA 2:196975905-197591368
CIL_0002KH CIL_0002KH_0001 CGP 2:197453423-197516737
CIL_00042Q CIL_00042Q_0002 CGP 2:197486581-197516737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0044267 IEA cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 957
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 944
ENSMUST00000189810 RP24-292D18.1-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000144077 Hspd1-003 protein_coding Mus_musculus 0 606
ENSMUST00000121528 Gm14935-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000122013 Gm12608-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000169520 Gm17101-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000118299 Gm12667-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000189212 RP23-274N9.1-001 processed_pseudogene Mus_musculus 0 226

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