C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452430 RP11-501J20.3-001 ENSG00000236171 9606 - 10:117196168-117196654 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverOvaryTestisENST00000452430
Transcript ID Adrenal Breast Liver Ovary Testis
ENST00000452430 0.030±0.00 0.030±0.00 0.026±0.00 0.048±0.00 0.053±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YJ CIL_0007YJ_0001 VISTA 10:116794613-117395732
CIL_0007ZF CIL_0007ZF_0001 VISTA 10:116796186-117397238
CIL_0008H6 CIL_0008H6_0001 VISTA 10:116948553-117549645
CIL_0007KI CIL_0007KI_0001 UCNEbase 10:116961332-118177484
CIL_00019Z CIL_00019Z_0001 CGP 10:117128521-117210299

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000079794 Gm15732-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000092011 Gm16519-201 protein_coding Mus_musculus 0 198
ENSMUST00000121298 Rpl12-ps2-001 processed_pseudogene Mus_musculus 6.00036e-42 174

Loading