C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 57
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452488 HNRNPA1P57-001 ENSG00000237442 9606 + 2:41156598-41157555 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartMuscleTestisENST00000452488
Transcript ID Adipose Adrenal Brain Breast Heart Muscle Testis
ENST00000452488 0.052±0.00 0.014±0.00 0.014±0.00 0.147±0.13 0.031±0.00 0.083±0.00 0.036±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1138
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1138
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1098
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1074
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1066
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1055
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 904
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 856
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 856
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 737
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 1e-32 145

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