C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452665 RP11-423E7.1-001 ENSG00000237483 9606 - 3:172225428-172225872 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungOvaryTestisENST00000452665
Transcript ID Adrenal Colon Lung Ovary Testis
ENST00000452665 0.055±0.00 0.778±0.00 0.170±0.00 0.206±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049P CIL_00049P_0002 CGP 3:172039628-172448456

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 274
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 274
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000117559 Gm13215-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000121261 Gm8317-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000121696 Gm12882-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000121742 Gm11759-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 195
ENSMUST00000191424 RP24-388H6.1-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000121502 Gm14101-001 processed_pseudogene Mus_musculus 3e-20 102

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