C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452680 HNRNPA1P43-001 ENSG00000214204 9606 - 1:115856910-115857819 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000452680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000452680 0.122±0.00 0.142±0.00 0.157±0.00 0.014±0.00 0.039±0.00 0.038±0.00 0.042±0.00 0.013±0.00 0.012±0.00 0.176±0.00 0.047±0.01 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0001 VISTA 1:115492363-116093752

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 785
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 785
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 785
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 725
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 623
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 466
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 3e-28 130
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 2e-25 121

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