C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB, member of RAS oncogene family-like 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452831 RABL2A-011 ENSG00000144134 9606 + 2:113627283-113643328 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryENST00000452831
Transcript ID Colon Liver Ovary
ENST00000452831 0.275±0.00 0.082±0.00 1.299±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172053 Rabl2-006 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000165747 Rabl2-004 retained_intron Mus_musculus 0 313
ENSMUST00000023294 Rabl2-001 protein_coding Mus_musculus 0 313
ENSMUST00000094056 Rabl2-002 protein_coding Mus_musculus 0 272
ENSMUST00000171580 Rabl2-008 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000172074 Rabl2-011 retained_intron Mus_musculus 0 270
ENSMUST00000169466 Rabl2-010 nonsense_mediated_decay Mus_musculus 0 268
ENSMUST00000163376 Rabl2-003 retained_intron Mus_musculus 0 198
ENSMUST00000170126 Rabl2-009 nonsense_mediated_decay Mus_musculus 0 198
ENSMUST00000171826 Rabl2-005 protein_coding Mus_musculus 1e-29 135
ENSMUST00000171142 Rabl2-007 processed_transcript Mus_musculus 7e-27 126

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