C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ribosomal protein L3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000453303  |
RPL3-012 |
ENSG00000100316 |
9606 | - |
22:39314700-39319111  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003NT | CIL_0003NT_0001 | CGP | 22:39223359-39320389 |
| CIL_0000CB | CIL_0000CB_0001 | CGP | 22:39312882-39385588 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005622 | IEA | intracellular |
| GO:0005730 | IDA | nucleolus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120557
|
Rpl3-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 1029 |
|
ENSMUST00000081650
|
Rpl3-001 | protein_coding | Mus_musculus | 0 | 1029 |
|
ENSMUST00000117131
|
Rpl3-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 1020 |
|
ENSMUST00000089501
|
Gm5879-201 | processed_pseudogene | Mus_musculus | 0 | 1018 |
|
ENSMUST00000118069
|
Gm12816-001 | processed_pseudogene | Mus_musculus | 0 | 974 |
|
ENSMUST00000188025
|
Rpl3-007 | retained_intron | Mus_musculus | 0 | 863 |
|
ENSMUST00000121173
|
Gm11765-001 | processed_pseudogene | Mus_musculus | 0 | 708 |
|
ENSMUST00000121389
|
Gm11662-001 | processed_pseudogene | Mus_musculus | 0 | 643 |
|
ENSMUST00000185306
|
Rpl3-003 | protein_coding | Mus_musculus | 0 | 621 |
|
ENSDART00000011251
|
rpl3-001 | protein_coding | Danio_rerio | 0 | 614 |
|
ENSMUST00000187578
|
Rpl3-002 | retained_intron | Mus_musculus | 0 | 584 |
|
ENSMUST00000187832
|
Rpl3-006 | nonsense_mediated_decay | Mus_musculus | 0 | 361 |
|
ENSDART00000147048
|
rpl3-002 | processed_transcript | Danio_rerio | 0 | 207 |
