C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12 (potassium/chloride transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454036 SLC12A5-003 ENSG00000124140 9606 + 20:46021717-46057702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000454036
Transcript ID Brain Colon
ENST00000454036 5.125±0.00 0.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GI CIL_0006GI_0001 CGP 20:46008908-46060150
CIL_0007BH CIL_0007BH_0001 CGP 20:46021717-46089952

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006810 NAS:IEA transport
GO:0006811 TAS:IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0006821 IEA chloride transport
GO:0006873 NAS cellular ion homeostasis
GO:0007268 IEA synaptic transmission
GO:0007612 IEA learning
GO:0015377 IEA cation:chloride symporter activity
GO:0015379 NAS potassium:chloride symporter activity
GO:0016020 IEA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0019901 IPI protein kinase binding
GO:0035264 IEA multicellular organism growth
GO:0040040 IEA thermosensory behavior
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0043198 IEA dendritic shaft
GO:0055085 TAS:IEA transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099092 Slc12a5-001 protein_coding Mus_musculus 0 4527
ENSDART00000057258 slc12a5a-201 protein_coding Danio_rerio 0 1096
ENSDART00000157129 slc12a5a-001 protein_coding Danio_rerio 0 1096
ENSDART00000009569 slc12a5b-201 protein_coding Danio_rerio 0 811
ENSDART00000140365 slc12a5b-001 protein_coding Danio_rerio 0 811
ENSMUST00000135918 Slc12a5-004 retained_intron Mus_musculus 0 472
ENSMUST00000124372 Slc12a5-003 protein_coding Mus_musculus 0 263
ENSMUST00000034370 Slc12a4-201 protein_coding Mus_musculus 8e-34 150
ENSMUST00000116429 Slc12a4-001 protein_coding Mus_musculus 8e-34 150

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