C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454105 RP11-302K17.4-001 ENSG00000229629 9606 + 10:102089968-102090062 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000454105
Transcript ID Breast Muscle
ENST00000454105 0.209±0.00 0.202±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WD CIL_0005WD_0001 CGP 10:102065390-102120453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109072 Skp1a-002 protein_coding Mus_musculus 1e-27 124
ENSMUST00000166537 Skp1a-006 protein_coding Mus_musculus 1e-27 124
ENSMUST00000093121 Skp1a-003 retained_intron Mus_musculus 1e-27 124
ENSMUST00000037324 Skp1a-001 protein_coding Mus_musculus 1e-27 124
ENSMUST00000147684 Skp1a-004 nonsense_mediated_decay Mus_musculus 1e-27 124
ENSMUST00000119054 Gm12988-001 processed_pseudogene Mus_musculus 1e-16 88

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