C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTAGE family, member 3, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454280 CTAGE3P-001 ENSG00000232872 9606 - 13:51908218-51910621 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000454280
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000454280 0.019±0.00 0.087±0.00 0.030±0.02 0.080±0.07 0.084±0.06 0.022±0.02 0.242±0.23 0.013±0.00 0.342±0.00 0.195±0.16 0.026±0.00 1.550±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JJ CIL_0002JJ_0001 CGP 13:51861981-52011494

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176464 Ctage5-011 protein_coding Mus_musculus 0 1812
ENSMUST00000175912 Ctage5-003 protein_coding Mus_musculus 0 1810
ENSMUST00000176752 Ctage5-004 nonsense_mediated_decay Mus_musculus 0 1764
ENSMUST00000170992 Ctage5-007 protein_coding Mus_musculus 0 1605
ENSMUST00000176892 Ctage5-002 protein_coding Mus_musculus 0 1605
ENSMUST00000176322 Ctage5-008 protein_coding Mus_musculus 0 1604
ENSMUST00000069430 Ctage5-001 protein_coding Mus_musculus 0 1604
ENSMUST00000176617 Ctage5-014 nonsense_mediated_decay Mus_musculus 0 1452
ENSMUST00000176336 Ctage5-013 nonsense_mediated_decay Mus_musculus 0 1218
ENSMUST00000177162 Ctage5-012 protein_coding Mus_musculus 0 1122
ENSMUST00000177225 Ctage5-006 protein_coding Mus_musculus 0 1120
ENSMUST00000175877 Ctage5-010 protein_coding Mus_musculus 0 915
ENSMUST00000175659 Ctage5-015 retained_intron Mus_musculus 0 392
ENSMUST00000175837 Ctage5-021 nonsense_mediated_decay Mus_musculus 0 372

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