C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L23a pseudogene 81
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455252 RPL23AP81-001 ENSG00000242748 9606 + 20:41196691-41197157 transcribed_processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AV CIL_0009AV_0001 VISTA 20:40645674-41248255
CIL_0004EC CIL_0004EC_0001 CGP 20:41028818-41196787
CIL_0002I4 CIL_0002I4_0001 CGP 20:41136960-41317672
CIL_0004E6 CIL_0004E6_0001 CGP 20:41178448-41360582

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119375 Rpl23a-ps2-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 2e-32 143
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 2e-31 139
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 8e-31 137
ENSMUST00000190969 RP23-349I9.25-001 processed_pseudogene Mus_musculus 2e-27 126

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