C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TOX high mobility group box family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455393 TOX4-003 ENSG00000092203 9606 + 14:21477203-21496755 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000455393
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000455393 18.231±0.00 12.033±0.00 12.178±0.00 9.366±0.00 6.274±2.51 5.450±1.44 10.271±0.00 13.057±8.09 11.253±2.57 16.572±1.49 21.897±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JD CIL_0003JD_0001 CGP 14:21385194-21476973
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074
CIL_0005QL CIL_0005QL_0001 CGP 14:21459020-21499175
CIL_0002HL CIL_0002HL_0001 CGP 14:21476597-21511375

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022766 Tox4-001 protein_coding Mus_musculus 0 1912
ENSMUST00000071842 Gm5828-001 processed_pseudogene Mus_musculus 0 1670
ENSMUST00000152493 Tox4-002 retained_intron Mus_musculus 0 1170
ENSMUST00000137753 Tox4-003 retained_intron Mus_musculus 0 431
ENSMUST00000173361 Tox4-005 processed_transcript Mus_musculus 0 342
ENSMUST00000172655 Tox4-004 retained_intron Mus_musculus 1e-29 135

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