| Transcript ID | Adipose | Brain | Colon |
|---|---|---|---|
| ENST00000455528 | 11.084±0.00 | 3.105±0.00 | 8.595±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SON DNA binding protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000455528  |
SON-004 |
ENSG00000159140 |
9606 | + |
21:33543064-33577481  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007EH | CIL_0007EH_0001 | CGP | 21:33485530-33543491 |
| CIL_000466 | CIL_000466_0001 | CGP | 21:33503931-33577481 |
| CIL_00037O | CIL_00037O_0001 | CGP | 21:33542618-33588708 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000226 | IMP | microtubule cytoskeleton organization |
| GO:0000910 | IMP | cytokinesis |
| GO:0003676 | TAS | nucleic acid binding |
| GO:0003677 | IEA | DNA binding |
| GO:0003723 | IDA | RNA binding |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006397 | IDA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0016607 | IDA | nuclear speck |
| GO:0043066 | IDA | negative regulation of apoptotic process |
| GO:0043484 | IDA | regulation of RNA splicing |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0051726 | IMP | regulation of cell cycle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000114037
|
Son-013 | protein_coding | Mus_musculus | 0 | 5299 |
|
ENSMUST00000140312
|
Son-005 | nonsense_mediated_decay | Mus_musculus | 0 | 5299 |
|
ENSMUST00000119368
|
Son-003 | protein_coding | Mus_musculus | 0 | 5299 |
|
ENSMUST00000117633
|
Son-001 | protein_coding | Mus_musculus | 0 | 5299 |
|
ENSMUST00000114036
|
Son-002 | protein_coding | Mus_musculus | 0 | 5297 |
|
ENSMUST00000147891
|
Son-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1705 |
|
ENSMUST00000122302
|
Son-012 | protein_coding | Mus_musculus | 0 | 1454 |
|
ENSMUST00000146079
|
Son-010 | processed_transcript | Mus_musculus | 0 | 1245 |
|
ENSMUST00000133589
|
Son-009 | processed_transcript | Mus_musculus | 0 | 765 |
|
ENSMUST00000145235
|
Son-007 | processed_transcript | Mus_musculus | 0 | 691 |
|
ENSMUST00000147461
|
Son-006 | processed_transcript | Mus_musculus | 0 | 527 |
|
ENSMUST00000151503
|
Son-011 | retained_intron | Mus_musculus | 0 | 296 |
|
ENSMUST00000133942
|
Donson-007 | protein_coding | Mus_musculus | 1e-20 | 108 |
