C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455727 LDLR-007 ENSG00000130164 9606 + 19:11089463-11131484 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058P CIL_00058P_0003 CGP 19:10961001-11133816
CIL_000169 CIL_000169_0001 CGP 19:11089362-11155808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0001948 IPI glycoprotein binding
GO:0005041 IDA low-density lipoprotein receptor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005764 IDA lysosome
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005794 IDA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005905 IDA coated pit
GO:0006629 TAS lipid metabolic process
GO:0006897 TAS endocytosis
GO:0006898 TAS receptor-mediated endocytosis
GO:0007603 TAS phototransduction, visible light
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0010008 TAS endosome membrane
GO:0010867 ISS positive regulation of triglyceride biosynthetic process
GO:0010899 ISS regulation of phosphatidylcholine catabolic process
GO:0015914 ISS phospholipid transport
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0030229 IDA very-low-density lipoprotein particle receptor activity
GO:0030299 IMP intestinal cholesterol absorption
GO:0030301 IMP cholesterol transport
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0034362 IEA low-density lipoprotein particle
GO:0034383 IMP low-density lipoprotein particle clearance
GO:0042157 TAS lipoprotein metabolic process
GO:0042632 IMP cholesterol homeostasis
GO:0043235 IDA receptor complex
GO:0044281 TAS small molecule metabolic process
GO:0070508 ISS cholesterol import

Homologs

No Homologs available.

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