C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455837 RP11-269M20.1-001 ENSG00000213956 9606 + 5:50633124-50633602 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleTestisENST00000455837
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Testis
ENST00000455837 0.031±0.00 0.034±0.00 0.066±0.00 0.061±0.00 0.393±0.00 0.148±0.00 0.342±0.00 0.143±0.00 0.060±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 512
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 490
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 483
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 464
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 459
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 453
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 433
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 418
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 9.94922e-44 180
ENSMUST00000121356 Gm6079-001 processed_pseudogene Mus_musculus 6e-32 141
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 1e-28 130

Loading