C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456162 RP11-58A11.2-001 ENSG00000229519 9606 + 1:6547905-6548619 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverOvaryPlacentaTestisENST00000456162
Transcript ID Adipose Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000456162 0.039±0.00 0.359±0.00 0.038±0.00 0.370±0.00 0.211±0.00 0.104±0.00 0.138±0.03 0.465±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084445 Gm10154-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000121998 Rpl34-ps1-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000079085 Rpl34-002 protein_coding Mus_musculus 0 272
ENSMUST00000062601 Rpl34-001 protein_coding Mus_musculus 0 272
ENSMUST00000081679 Gm6404-201 processed_pseudogene Mus_musculus 0 270
ENSMUST00000136334 Gm10086-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000117957 Gm7857-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000135691 Rpl34-004 retained_intron Mus_musculus 0 215
ENSMUST00000122371 Gm13786-001 processed_pseudogene Mus_musculus 7e-16 88

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