C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456314 IRF6-002 ENSG00000117595 9606 - 1:209790726-209802166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLungMuscleENST00000456314
Transcript ID Adipose Bladder Lung Muscle
ENST00000456314 0.498±0.00 1.978±0.00 1.357±0.00 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089N CIL_00089N_0001 VISTA 1:209189712-209790617
CIL_0007ZL CIL_0007ZL_0001 VISTA 1:209515705-210116479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000975 IEA regulatory region DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076521 Irf6-001 protein_coding Mus_musculus 0 1101
ENSMUST00000138826 Irf6-004 retained_intron Mus_musculus 0 876
ENSMUST00000140066 Irf6-002 retained_intron Mus_musculus 0 671

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