C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456468 NDUFAF4P3-001 ENSG00000236411 9606 - 3:37789921-37790445 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000456468
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000456468 0.045±0.00 0.419±0.00 0.343±0.20 0.858±0.48 0.555±0.01 0.107±0.00 0.410±0.00 0.692±0.00 0.370±0.00 0.186±0.00 0.506±0.27 0.231±0.07 0.831±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VQ CIL_0005VQ_0001 CGP 3:37452115-37984469
CIL_0008CZ CIL_0008CZ_0001 VISTA 3:37464508-38067589
CIL_00099X CIL_00099X_0001 VISTA 3:37469210-38073013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029925 Ndufaf4-001 protein_coding Mus_musculus 0 372
ENSMUST00000146721 Ndufaf4-002 processed_transcript Mus_musculus 0 339
ENSMUST00000118523 Gm3712-001 processed_pseudogene Mus_musculus 0 296

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