C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endo/exonuclease (5'-3'), endonuclease G-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457367 EXOG-006 ENSG00000157036 9606 + 3:38496365-38525121 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverPlacentaTestisENST00000457367
Transcript ID Adrenal Brain Colon Heart Kidney Liver Placenta Testis
ENST00000457367 1.222±0.00 1.134±0.00 0.267±0.00 3.506±0.00 0.532±0.00 0.125±0.00 0.579±0.07 1.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BE CIL_0008BE_0001 VISTA 3:38261144-38866061
CIL_0005W0 CIL_0005W0_0001 CGP 3:38453851-38542161
CIL_0005VU CIL_0005VU_0001 CGP 3:38496127-38649673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000006 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00001 57

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