C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | CCR4-NOT transcription complex, subunit 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000457463  |
CNOT3-006 |
ENSG00000088038 |
9606 | + |
19:54149560-54154455  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005OD | CIL_0005OD_0001 | CGP | 19:54115410-54155681 |
| CIL_0001U4 | CIL_0001U4_0001 | CGP | 19:54137728-54159882 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000038913
|
Cnot3-002 | protein_coding | Mus_musculus | 0 | 1003 |
|
ENSMUST00000143085
|
Cnot3-001 | retained_intron | Mus_musculus | 0 | 1003 |
|
ENSMUST00000135977
|
Cnot3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 821 |
|
ENSMUST00000129973
|
Cnot3-005 | retained_intron | Mus_musculus | 0 | 656 |
|
ENSDART00000136697
|
cnot3b-001 | protein_coding | Danio_rerio | 0 | 326 |
|
ENSDART00000081485
|
cnot3b-202 | protein_coding | Danio_rerio | 0 | 318 |
|
ENSMUST00000144097
|
Cnot3-004 | retained_intron | Mus_musculus | 0 | 189 |
|
ENSMUST00000160200
|
Cnot3-007 | protein_coding | Mus_musculus | 1.00053e-42 | 178 |
