C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458500 RPL10-009 ENSG00000147403 9606 + X:154398378-154400917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000458500
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000458500 320.391±0.00 483.662±0.00 68.606±0.00 218.524±0.00 284.918±0.00 67.933±56.50 146.106±0.00 73.069±47.61 546.815±0.00 406.320±0.00 367.655±257.48 292.416±93.91 121.490±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 641
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 438
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 438
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 436
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 435
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 425
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 409
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 390
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 390
ENSMUST00000138954 Rpl10-006 retained_intron Mus_musculus 0 298
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 298
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0 276
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 9.99995e-41 171
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 1e-35 154

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