C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: interferon regulatory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000459982 IRF1-004 ENSG00000125347 9606 - 5:132486123-132490765 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000459982
Transcript ID Kidney
ENST00000459982 3.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019043 Irf1-002 protein_coding Mus_musculus 0 516
ENSMUST00000123376 Irf1-005 protein_coding Mus_musculus 0 516
ENSMUST00000108922 Irf1-008 protein_coding Mus_musculus 0 516
ENSMUST00000140866 Irf1-010 protein_coding Mus_musculus 0 516
ENSMUST00000108920 Irf1-001 protein_coding Mus_musculus 0 516
ENSMUST00000133291 Irf1-006 protein_coding Mus_musculus 0 422
ENSMUST00000170390 Gm17334-201 protein_coding Mus_musculus 3e-39 167
ENSMUST00000142221 Irf1-009 nonsense_mediated_decay Mus_musculus 1e-38 165
ENSMUST00000138913 Irf1-007 protein_coding Mus_musculus 3e-29 134

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