C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPOC domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460061 SPOCD1-004 ENSG00000134668 9606 - 1:31794516-31798631 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverMuscleOvaryPlacentaENST00000460061
Transcript ID Breast Kidney Liver Muscle Ovary Placenta
ENST00000460061 0.051±0.00 0.112±0.00 0.357±0.00 0.079±0.00 0.079±0.01 0.052±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156128 Phykpl-003 retained_intron Mus_musculus 0.0000000005 71
ENSMUST00000151908 Phkg2-003 retained_intron Mus_musculus 0.000000006 68
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0.000001 60
ENSMUST00000135487 Mettl5-003 retained_intron Mus_musculus 0.000004 58
ENSMUST00000020608 Ppp2ca-001 protein_coding Mus_musculus 0.00005 55

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