C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460284 XRCC5-010 ENSG00000079246 9606 + 2:216116885-216205423 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungOvaryENST00000460284
Transcript ID Bladder Breast Colon Heart Liver Lung Ovary
ENST00000460284 2.904±0.00 5.192±0.00 2.366±0.00 1.478±0.00 3.563±0.00 3.191±0.00 6.983±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ME CIL_0005ME_0001 CGP 2:216081866-216206303
CIL_0000AO CIL_0000AO_0002 CGP 2:216107464-216372027

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027379 Xrcc5-201 protein_coding Mus_musculus 0 1834

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