C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TruB pseudouridine (psi) synthase family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460320 TRUB2-003 ENSG00000167112 9606 - 9:128309693-128322413 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverMuscleENST00000460320
Transcript ID Breast Colon Heart Kidney Liver Muscle
ENST00000460320 1.198±0.00 2.210±0.00 9.387±0.00 4.709±0.00 2.555±0.00 3.288±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E8 CIL_0007E8_0001 CGP 9:128309103-128334072

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048044 Trub2-001 protein_coding Mus_musculus 0 573
ENSMUST00000156846 Trub2-003 nonsense_mediated_decay Mus_musculus 0 503
ENSMUST00000177133 Trub2-010 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000176167 Trub2-007 retained_intron Mus_musculus 0 311
ENSMUST00000113807 Trub2-002 protein_coding Mus_musculus 0 255
ENSMUST00000177467 Trub2-008 protein_coding Mus_musculus 0 254
ENSMUST00000176312 Trub2-009 nonsense_mediated_decay Mus_musculus 1.96182e-44 183
ENSMUST00000148120 Trub2-005 retained_intron Mus_musculus 8.99634e-43 178

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