C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurobeachin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460355 NBEAL1-003 ENSG00000144426 9606 + 2:203180956-203191335 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000460355
Transcript ID Muscle
ENST00000460355 0.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020V CIL_00020V_0001 CGP 2:202912214-203226378
CIL_0001QW CIL_0001QW_0001 CGP 2:203014879-203305840

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 782
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 782
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 710
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000092011 Gm16519-201 protein_coding Mus_musculus 0 507
ENSMUST00000125415 Rpl12-004 processed_transcript Mus_musculus 0 483
ENSMUST00000079794 Gm15732-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000162291 Nbeal1-002 nonsense_mediated_decay Mus_musculus 0 401
ENSMUST00000035569 Nbeal1-010 protein_coding Mus_musculus 0 401
ENSMUST00000160834 Nbeal1-001 protein_coding Mus_musculus 0 401
ENSMUST00000121298 Rpl12-ps2-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000159344 Nbeal1-004 protein_coding Mus_musculus 0 237
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 0 195
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 3.99931e-42 178
ENSMUST00000133842 Rpl12-005 processed_transcript Mus_musculus 2e-40 172
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 4e-37 161
ENSDART00000141676 rpl12-002 processed_transcript Danio_rerio 0.000000008 68
ENSDART00000135459 rpl12-003 retained_intron Danio_rerio 0.000000008 68
ENSDART00000008807 rpl12-001 protein_coding Danio_rerio 0.000000008 68

Loading