C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: golgi-associated, gamma adaptin ear containing, ARF binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460957 GGA1-022 ENSG00000100083 9606 + 22:37630668-37632677 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000460957
Transcript ID Breast
ENST00000460957 4.614±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040E CIL_00040E_0001 CGP 22:37570246-37633564
CIL_00040D CIL_00040D_0001 CGP 22:37608475-37666932

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041587 Gga1-201 protein_coding Mus_musculus 0 641
ENSMUST00000128437 Gga3-006 processed_transcript Mus_musculus 1e-30 137
ENSMUST00000106508 Gga3-002 protein_coding Mus_musculus 1e-30 137
ENSMUST00000019135 Gga3-001 protein_coding Mus_musculus 1e-30 137
ENSMUST00000123485 Gga3-010 processed_transcript Mus_musculus 8e-23 111
ENSMUST00000156173 Gga3-003 nonsense_mediated_decay Mus_musculus 8e-18 95
ENSMUST00000154832 Gga3-011 processed_transcript Mus_musculus 0.0000000001 71

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