C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461543 AC016737.1-001 ENSG00000235414 9606 + 2:174043008-174043880 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverLungPlacentaTestisENST00000461543
Transcript ID Bladder Brain Kidney Liver Lung Placenta Testis
ENST00000461543 0.151±0.00 0.020±0.00 0.019±0.00 0.073±0.00 0.051±0.00 0.048±0.01 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0001 UCNEbase 2:173198009-174351945
CIL_0008JW CIL_0008JW_0001 VISTA 2:173820816-174422736
CIL_0008K1 CIL_0008K1_0001 VISTA 2:173824009-174425635
CIL_0008S8 CIL_0008S8_0001 VISTA 2:173876675-174477772
CIL_0003II CIL_0003II_0002 CGP 2:173906459-174248698
CIL_00096H CIL_00096H_0001 VISTA 2:174031315-174632386
CIL_0008GI CIL_0008GI_0001 VISTA 2:174038535-174640167
CIL_0008K2 CIL_0008K2_0001 VISTA 2:174042582-174643514

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 464

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