C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461981 CLK1-002 ENSG00000013441 9606 - 2:200853076-200860983 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyOvaryENST00000461981
Transcript ID Adrenal Brain Breast Kidney Ovary
ENST00000461981 7.261±0.00 1.636±0.00 4.820±0.96 2.875±0.65 3.618±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AX CIL_0002AX_0001 CGP 2:200810594-200864744
CIL_0002AY CIL_0002AY_0001 CGP 2:200853009-200889303

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156931 Clk1-002 retained_intron Mus_musculus 0 1253
ENSMUST00000129577 Clk1-003 retained_intron Mus_musculus 0 1059
ENSMUST00000123580 Clk1-006 retained_intron Mus_musculus 0 832
ENSMUST00000151338 Clk1-005 nonsense_mediated_decay Mus_musculus 0 824
ENSMUST00000148330 Clk1-004 nonsense_mediated_decay Mus_musculus 0 824
ENSMUST00000034868 Clk1-001 protein_coding Mus_musculus 0 824
ENSMUST00000148467 Clk4-014 retained_intron Mus_musculus 0 558
ENSMUST00000186552 Clk1-013 retained_intron Mus_musculus 0 457
ENSMUST00000141570 Clk1-010 processed_transcript Mus_musculus 0 420
ENSMUST00000131051 Clk1-012 retained_intron Mus_musculus 0 387
ENSMUST00000129303 Clk1-009 processed_transcript Mus_musculus 0 315
ENSMUST00000135380 Clk1-008 retained_intron Mus_musculus 0 265
ENSMUST00000093132 Clk4-001 protein_coding Mus_musculus 6e-30 137
ENSMUST00000130641 Clk4-005 protein_coding Mus_musculus 6e-30 137

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