C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin/nucleoplasmin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462391 NPM3-004 ENSG00000107833 9606 - 10:101781589-101783375 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungTestisENST00000462391
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Testis
ENST00000462391 7.279±0.00 5.549±0.00 3.384±0.00 4.465±0.00 7.948±0.00 0.261±0.00 9.173±0.00 1.796±0.00 4.917±0.00 16.684±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089J CIL_00089J_0001 VISTA 10:101185253-101786853
CIL_000942 CIL_000942_0001 VISTA 10:101206892-101808215
CIL_00099F CIL_00099F_0001 VISTA 10:101467436-102068636
CIL_00099E CIL_00099E_0001 VISTA 10:101480423-102081273
CIL_0005NC CIL_0005NC_0001 CGP 10:101770130-101783413
CIL_0005NB CIL_0005NB_0001 CGP 10:101781325-101818465

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119728 Npm3-ps1-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000070215 Npm3-001 protein_coding Mus_musculus 0 339
ENSMUST00000144165 Npm3-002 retained_intron Mus_musculus 0 233

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