C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class I, A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462536 HLA-A-005 ENSG00000206505 9606 + CHR_HSCHR6_MHC_QBL_CTG1:29931918-29935265 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172912 H2-K1-003 protein_coding Mus_musculus 0 547
ENSMUST00000025181 H2-K1-001 protein_coding Mus_musculus 0 529
ENSMUST00000114311 H2-K1-002 retained_intron Mus_musculus 0 527
ENSMUST00000173080 H2-Bl-201 protein_coding Mus_musculus 0 464
ENSMUST00000173075 H2-K1-010 protein_coding Mus_musculus 0 429
ENSMUST00000145260 H2-M5-003 retained_intron Mus_musculus 0 425
ENSMUST00000176712 H2-M5-002 protein_coding Mus_musculus 0 416
ENSMUST00000176784 H2-M5-005 protein_coding Mus_musculus 0 414
ENSMUST00000169189 H2-M5-001 protein_coding Mus_musculus 0 414
ENSMUST00000185087 H2-Bl-005 nonsense_mediated_decay Mus_musculus 0 403
ENSMUST00000174250 H2-K2-001 unprocessed_pseudogene Mus_musculus 0 292
ENSMUST00000074806 H2-Q2-001 protein_coding Mus_musculus 0 252
ENSMUST00000113667 H2-M5-004 protein_coding Mus_musculus 0 248
ENSMUST00000172979 H2-Q5-001 polymorphic_pseudogene Mus_musculus 0 248
ENSMUST00000174854 H2-Q5-002 retained_intron Mus_musculus 0 248
ENSMUST00000076256 H2-Q7-201 protein_coding Mus_musculus 0 237
ENSMUST00000078205 H2-Q7-202 protein_coding Mus_musculus 0 237
ENSMUST00000116598 H2-Q7-203 protein_coding Mus_musculus 0 237
ENSMUST00000173788 H2-Q7-003 retained_intron Mus_musculus 0 237
ENSMUST00000071951 H2-Q7-001 protein_coding Mus_musculus 0 237
ENSMUST00000097335 Gm8909-201 protein_coding Mus_musculus 0 237
ENSMUST00000040467 Gm8909-001 protein_coding Mus_musculus 0 237
ENSMUST00000173353 Gm8909-002 protein_coding Mus_musculus 0 237
ENSMUST00000174094 Gm10499-002 transcribed_unprocessed_pseudogene Mus_musculus 0 220
ENSMUST00000174471 H2-T23-005 retained_intron Mus_musculus 0 220
ENSMUST00000174161 H2-T23-003 retained_intron Mus_musculus 0 220
ENSMUST00000172538 C920025E04Rik-001 unprocessed_pseudogene Mus_musculus 0 211
ENSMUST00000174778 Gm10499-001 retained_intron Mus_musculus 0 211
ENSMUST00000174839 H2-T23-002 retained_intron Mus_musculus 0 209
ENSMUST00000102678 H2-T23-001 protein_coding Mus_musculus 0 209
ENSMUST00000173402 Gm5682-001 unprocessed_pseudogene Mus_musculus 0 207
ENSMUST00000184502 H2-Bl-008 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000172782 H2-K1-007 processed_transcript Mus_musculus 1.99993e-41 174

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