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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sorting nexin 10 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000462993  |
SNX10-003 |
ENSG00000086300 |
9606 | + |
7:26370388-26372746  |
processed_transcript |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008Q3 | CIL_0008Q3_0001 | VISTA | 7:25714231-26318034 |
| CIL_000874 | CIL_000874_0001 | VISTA | 7:25760923-26361842 |
| CIL_0009DE | CIL_0009DE_0001 | VISTA | 7:26185042-26786016 |
| CIL_0007OD | CIL_0007OD_0001 | UCNEbase | 7:26191819-26506343 |
| CIL_0002CN | CIL_0002CN_0001 | CGP | 7:26201162-26374329 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000179365
|
Snx10-201 | protein_coding | Mus_musculus | 0 | 409 |
|
ENSMUST00000049152
|
Snx10-001 | protein_coding | Mus_musculus | 0 | 409 |
|
ENSMUST00000114439
|
Snx10-004 | protein_coding | Mus_musculus | 0 | 375 |
|
ENSMUST00000149024
|
Snx10-003 | nonsense_mediated_decay | Mus_musculus | 0 | 364 |
|
ENSMUST00000116606
|
Gm14806-001 | processed_pseudogene | Mus_musculus | 0 | 322 |
|
ENSMUST00000137642
|
Gm15534-001 | processed_pseudogene | Mus_musculus | 0 | 285 |
