C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class I, L (pseudogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463348 HLA-L-002 ENSG00000243753 9606 + 6:30259597-30266951 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172785 H2-D1-001 protein_coding Mus_musculus 0 459
ENSMUST00000025181 H2-K1-001 protein_coding Mus_musculus 0 459
ENSMUST00000114311 H2-K1-002 retained_intron Mus_musculus 0 459
ENSMUST00000172912 H2-K1-003 protein_coding Mus_musculus 0 459
ENSMUST00000185087 H2-Bl-005 nonsense_mediated_decay Mus_musculus 0 455
ENSMUST00000097335 Gm8909-201 protein_coding Mus_musculus 0 435
ENSMUST00000040467 Gm8909-001 protein_coding Mus_musculus 0 435
ENSMUST00000173353 Gm8909-002 protein_coding Mus_musculus 0 435
ENSMUST00000076256 H2-Q7-201 protein_coding Mus_musculus 0 429
ENSMUST00000173625 Gm8909-004 processed_transcript Mus_musculus 0 429
ENSMUST00000113879 H2-Q6-201 protein_coding Mus_musculus 0 429
ENSMUST00000174699 H2-Q6-001 protein_coding Mus_musculus 0 429
ENSMUST00000174778 Gm10499-001 retained_intron Mus_musculus 0 424
ENSMUST00000174250 H2-K2-001 unprocessed_pseudogene Mus_musculus 0 422
ENSMUST00000078205 H2-Q7-202 protein_coding Mus_musculus 0 422
ENSMUST00000071951 H2-Q7-001 protein_coding Mus_musculus 0 422
ENSMUST00000073208 H2-Q1-001 protein_coding Mus_musculus 0 418
ENSMUST00000105041 H2-Q1-002 protein_coding Mus_musculus 0 418
ENSMUST00000172994 H2-Q1-003 retained_intron Mus_musculus 0 418
ENSMUST00000102678 H2-T23-001 protein_coding Mus_musculus 0 411
ENSMUST00000172979 H2-Q5-001 polymorphic_pseudogene Mus_musculus 0 411
ENSMUST00000173080 H2-Bl-201 protein_coding Mus_musculus 0 398
ENSMUST00000113742 Gm11127-001 protein_coding Mus_musculus 0 379
ENSMUST00000174839 H2-T23-002 retained_intron Mus_musculus 0 351
ENSMUST00000174161 H2-T23-003 retained_intron Mus_musculus 0 351
ENSMUST00000046131 Gm7030-201 protein_coding Mus_musculus 0 350
ENSMUST00000173322 Gm7030-001 protein_coding Mus_musculus 0 350
ENSMUST00000173075 H2-K1-010 protein_coding Mus_musculus 0 344
ENSMUST00000172968 Gm7030-202 protein_coding Mus_musculus 0 342
ENSMUST00000174693 Gm8909-003 processed_transcript Mus_musculus 0 329
ENSMUST00000087189 H2-K1-005 protein_coding Mus_musculus 0 329
ENSMUST00000174325 H2-D1-005 retained_intron Mus_musculus 0 327
ENSMUST00000077960 H2-T22-002 protein_coding Mus_musculus 0 324
ENSMUST00000080015 H2-T22-001 protein_coding Mus_musculus 0 324
ENSMUST00000173280 H2-T22-005 nonsense_mediated_decay Mus_musculus 0 324
ENSMUST00000173317 H2-K1-009 retained_intron Mus_musculus 0 322
ENSMUST00000173602 H2-K1-004 retained_intron Mus_musculus 0 322
ENSMUST00000185167 H2-Bl-002 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000184850 H2-Bl-006 retained_intron Mus_musculus 0 322
ENSMUST00000058801 H2-T22-003 protein_coding Mus_musculus 0 316
ENSMUST00000172633 H2-T22-004 retained_intron Mus_musculus 0 316
ENSMUST00000173016 H2-Q7-002 retained_intron Mus_musculus 0 302
ENSMUST00000173788 H2-Q7-003 retained_intron Mus_musculus 0 302
ENSMUST00000173435 H2-T3-007 retained_intron Mus_musculus 0 289
ENSMUST00000173133 H2-T3-006 nonsense_mediated_decay Mus_musculus 0 289
ENSMUST00000173577 H2-T3-004 retained_intron Mus_musculus 0 289
ENSMUST00000102675 H2-T3-001 protein_coding Mus_musculus 0 289
ENSMUST00000025312 H2-T3-005 protein_coding Mus_musculus 0 281
ENSMUST00000095300 H2-T3-003 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000174101 H2-T3-002 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000172663 H2-T3-008 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000173629 H2-T3-009 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000172895 Gm8810-001 unprocessed_pseudogene Mus_musculus 0 263
ENSMUST00000173127 Gm9574-001 unprocessed_pseudogene Mus_musculus 0 257
ENSMUST00000173402 Gm5682-001 unprocessed_pseudogene Mus_musculus 0 196
ENSMUST00000183999 H2-Bl-011 protein_coding Mus_musculus 0.000002 60

Loading