C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PDZ and LIM domain 7 (enigma) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000463411  |
PDLIM7-008 |
ENSG00000196923 |
9606 | - |
5:177491759-177497606  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008A2 | CIL_0008A2_0001 | VISTA | 5:177089375-177692188 |
| CIL_0002YE | CIL_0002YE_0001 | CGP | 5:177456608-177497606 |
| CIL_0002YF | CIL_0002YF_0001 | CGP | 5:177483394-177511274 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000046246
|
Pdlim7-001 | protein_coding | Mus_musculus | 0 | 368 |
|
ENSMUST00000131306
|
Pdlim7-007 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000069929
|
Pdlim7-003 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000069968
|
Pdlim7-002 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000155098
|
Pdlim7-004 | nonsense_mediated_decay | Mus_musculus | 0 | 366 |
|
ENSMUST00000153230
|
Pdlim7-006 | retained_intron | Mus_musculus | 0 | 364 |
|
ENSMUST00000128910
|
Pdlim7-005 | retained_intron | Mus_musculus | 0 | 363 |
|
ENSMUST00000144288
|
Pdlim7-008 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000136583
|
Pdlim7-010 | retained_intron | Mus_musculus | 0 | 318 |
|
ENSMUST00000153426
|
Pdlim7-009 | protein_coding | Mus_musculus | 0 | 198 |
