C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: corepressor interacting with RBPJ, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464393 CIR1-006 ENSG00000138433 9606 - 2:174349135-174351963 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungENST00000464393
Transcript ID Breast Lung
ENST00000464393 3.622±0.00 4.515±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0001 UCNEbase 2:173198009-174351945
CIL_0008JW CIL_0008JW_0001 VISTA 2:173820816-174422736
CIL_0008K1 CIL_0008K1_0001 VISTA 2:173824009-174425635
CIL_0008S8 CIL_0008S8_0001 VISTA 2:173876675-174477772
CIL_00096H CIL_00096H_0001 VISTA 2:174031315-174632386
CIL_0008GI CIL_0008GI_0001 VISTA 2:174038535-174640167
CIL_0008K2 CIL_0008K2_0001 VISTA 2:174042582-174643514
CIL_0001HA CIL_0001HA_0001 CGP 2:174334946-174395715
CIL_0003IH CIL_0003IH_0002 CGP 2:174348022-174429575

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118681 Gm2810-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000058615 Cir1-001 protein_coding Mus_musculus 0 313

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