C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif protein, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464781 RBMX-002 ENSG00000147274 9606 - X:136873449-136880725 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungENST00000464781
Transcript ID Bladder Brain Breast Lung
ENST00000464781 12.076±0.00 4.466±0.00 4.939±0.00 11.504±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PR CIL_0000PR_0002 CGP X:136665547-136880764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114726 Rbmx-002 protein_coding Mus_musculus 0 1589
ENSMUST00000114730 Rbmx-005 protein_coding Mus_musculus 0 1589
ENSMUST00000143310 Rbmx-003 protein_coding Mus_musculus 0 1358
ENSMUST00000049245 Rbmxl1-201 protein_coding Mus_musculus 0 1343
ENSMUST00000094051 Gm7324-001 processed_pseudogene Mus_musculus 0 1086
ENSMUST00000098470 Rbmx-004 protein_coding Mus_musculus 0 966
ENSMUST00000140384 Rbmx-001 nonsense_mediated_decay Mus_musculus 0 643
ENSMUST00000133346 Rbmx-006 protein_coding Mus_musculus 0 296

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