C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family A (ABC1), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465352 ABCA4-002 ENSG00000198691 9606 - 1:94001508-94010929 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonTestisENST00000465352
Transcript ID Colon Testis
ENST00000465352 0.063±0.00 0.352±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DH CIL_0009DH_0001 VISTA 1:93546220-94147690
CIL_0009DJ CIL_0009DJ_0001 VISTA 1:93815311-94417966
CIL_0009DI CIL_0009DI_0001 VISTA 1:93946469-94547443

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141135 Abca4-004 processed_transcript Mus_musculus 0 743
ENSMUST00000013995 Abca4-001 protein_coding Mus_musculus 0 743
ENSMUST00000137616 Abca4-011 retained_intron Mus_musculus 0 398
ENSMUST00000144949 Abca4-010 retained_intron Mus_musculus 0 331
ENSDART00000051556 abca1b-201 protein_coding Danio_rerio 5e-16 90
ENSDART00000148461 abca1b-001 protein_coding Danio_rerio 5e-16 90

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