C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP, adenylate cyclase-associated protein, 2 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465994 CAP2-007 ENSG00000112186 9606 + 6:17393712-17556568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000465994
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000465994 0.704±0.00 19.854±0.00 0.835±0.00 0.643±0.00 4.389±0.00 0.098±0.00 4.344±0.00 0.221±0.00 25.741±0.00 1.029±0.00 1.529±0.00 0.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RO CIL_0003RO_0001 CGP 6:17281346-17557792
CIL_0003RP CIL_0003RP_0001 CGP 6:17393216-17611719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005886 IEA plasma membrane
GO:0007010 IEA cytoskeleton organization
GO:0007163 TAS establishment or maintenance of cell polarity
GO:0007165 TAS signal transduction
GO:0007190 TAS activation of adenylate cyclase activity
GO:0007411 TAS axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119341 Cap2-002 protein_coding Mus_musculus 0 828
ENSMUST00000021802 Cap2-001 protein_coding Mus_musculus 0 826
ENSMUST00000126687 Cap2-003 processed_transcript Mus_musculus 3e-19 100

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