C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466021 FGFR1-023 ENSG00000077782 9606 - 8:38417313-38422044 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000466021
Transcript ID Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000466021 6.336±0.00 21.018±0.00 21.034±0.00 1.687±0.00 39.840±0.00 14.669±0.00 5.461±0.00 13.485±0.89 89.769±0.00 49.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NR CIL_0008NR_0001 VISTA 8:38140056-38746180
CIL_0008SM CIL_0008SM_0001 VISTA 8:38252496-38854674
CIL_0008H7 CIL_0008H7_0001 VISTA 8:38253282-38854976
CIL_0008D9 CIL_0008D9_0001 VISTA 8:38350004-38951124

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126118 Fgfr1-011 retained_intron Mus_musculus 0 1042
ENSMUST00000179592 Fgfr1-202 protein_coding Mus_musculus 0 966
ENSMUST00000119398 Fgfr1-003 protein_coding Mus_musculus 0 966
ENSMUST00000117179 Fgfr1-002 protein_coding Mus_musculus 0 966
ENSMUST00000084027 Fgfr1-001 protein_coding Mus_musculus 0 966
ENSMUST00000138104 Fgfr1-007 processed_transcript Mus_musculus 0 881
ENSMUST00000178276 Fgfr1-201 protein_coding Mus_musculus 0 745
ENSMUST00000167764 Fgfr1-005 protein_coding Mus_musculus 0 745
ENSMUST00000120106 Fgfr1-015 retained_intron Mus_musculus 0 470
ENSDART00000067689 fgfr1b-201 protein_coding Danio_rerio 0 392
ENSDART00000075259 fgfr1b-202 protein_coding Danio_rerio 0 368
ENSMUST00000145218 Fgfr1-009 retained_intron Mus_musculus 0 298
ENSDART00000125883 fgfr3-202 protein_coding Danio_rerio 3e-32 143
ENSDART00000013534 fgfr3-201 protein_coding Danio_rerio 3e-32 143

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