C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyotrophic lateral sclerosis 2 (juvenile)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467448 ALS2-002 ENSG00000003393 9606 - 2:201759457-201780956 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENST00000467448
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000467448 1.300±0.00 1.710±0.00 0.887±0.00 2.316±0.00 1.135±0.16 1.405±0.00 1.765±0.29 1.356±0.00 1.057±0.08 0.953±0.29 1.952±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_0009CR CIL_0009CR_0001 VISTA 2:201587932-202188948
CIL_0000JK CIL_0000JK_0002 CGP 2:201644870-201781189
CIL_0000JL CIL_0000JL_0002 CGP 2:201700554-201895550

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159166 Als2-003 retained_intron Mus_musculus 0 1046
ENSMUST00000027178 Als2-001 protein_coding Mus_musculus 0 1046
ENSMUST00000163058 Als2-002 protein_coding Mus_musculus 0 1011
ENSMUST00000160945 Als2-004 protein_coding Mus_musculus 0 425

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