C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468074 RP11-102M11.1-001 ENSG00000240695 9606 - 3:136736500-136737229 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000468074
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000468074 0.016±0.00 0.520±0.00 0.913±0.00 0.078±0.02 0.778±0.74 1.127±1.10 0.164±0.12 0.848±0.69 0.662±0.60 3.325±0.00 0.015±0.00 0.404±0.46 0.802±0.00 0.232±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094657 Dnajc8-001 protein_coding Mus_musculus 0 809
ENSMUST00000105939 Dnajc8-006 protein_coding Mus_musculus 0 667
ENSMUST00000105940 Dnajc8-008 protein_coding Mus_musculus 0 634
ENSMUST00000150207 Dnajc8-009 protein_coding Mus_musculus 0 560
ENSMUST00000142281 Dnajc8-002 retained_intron Mus_musculus 0 547
ENSMUST00000138334 Dnajc8-007 nonsense_mediated_decay Mus_musculus 0 398
ENSMUST00000139074 Dnajc8-003 nonsense_mediated_decay Mus_musculus 0 385
ENSMUST00000156385 Dnajc8-005 protein_coding Mus_musculus 0 250
ENSMUST00000105937 Dnajc8-012 retained_intron Mus_musculus 0 226
ENSMUST00000067467 Dnajc8-010 nonsense_mediated_decay Mus_musculus 0 202
ENSMUST00000144073 Dnajc8-004 nonsense_mediated_decay Mus_musculus 4e-35 152

Loading