C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: STE20-related kinase adaptor beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468123 STRADB-008 ENSG00000082146 9606 + 2:201475671-201478567 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000468123
Transcript ID Muscle
ENST00000468123 12.478±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_0000JJ CIL_0000JJ_0002 CGP 2:201377207-201480846
CIL_00020Q CIL_00020Q_0001 CGP 2:201387858-201619178

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152318 Stradb-008 protein_coding Mus_musculus 0 534
ENSMUST00000027185 Stradb-001 protein_coding Mus_musculus 0 534
ENSMUST00000153990 Stradb-003 nonsense_mediated_decay Mus_musculus 0 534
ENSMUST00000123301 Stradb-002 nonsense_mediated_decay Mus_musculus 3e-37 159
ENSMUST00000114296 Stradb-004 protein_coding Mus_musculus 5e-20 102

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