C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 4 (inducible form)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468476 PABPC4-006 ENSG00000090621 9606 - 1:39560816-39564526 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124991 Pabpc4-006 processed_transcript Mus_musculus 3e-38 165
ENSMUST00000080178 Pabpc4-001 protein_coding Mus_musculus 3e-38 165
ENSMUST00000183940 Pabpc4-005 nonsense_mediated_decay Mus_musculus 3e-38 165
ENSMUST00000106241 Pabpc4-004 protein_coding Mus_musculus 3e-38 165
ENSMUST00000119395 Gm5466-001 processed_pseudogene Mus_musculus 6e-35 154
ENSMUST00000117060 Gm11841-001 processed_pseudogene Mus_musculus 6e-35 154
ENSMUST00000119849 Gm12623-001 processed_pseudogene Mus_musculus 2e-34 152
ENSMUST00000119791 Gm12620-001 processed_pseudogene Mus_musculus 2e-34 152
ENSMUST00000140182 Gm12612-001 processed_pseudogene Mus_musculus 2e-34 152
ENSMUST00000117339 Gm12626-001 processed_pseudogene Mus_musculus 8e-34 150
ENSMUST00000146065 Gm16345-001 processed_pseudogene Mus_musculus 3e-33 148
ENSMUST00000146156 Pabpc4-007 retained_intron Mus_musculus 1e-32 147
ENSMUST00000078734 Pabpc4-002 protein_coding Mus_musculus 1e-32 147
ENSMUST00000106243 Pabpc4-003 protein_coding Mus_musculus 1e-32 147
ENSMUST00000081204 Gm10110-201 protein_coding Mus_musculus 1e-32 147
ENSMUST00000120647 Gm11839-001 processed_pseudogene Mus_musculus 4e-32 145
ENSMUST00000118386 Gm15332-001 unprocessed_pseudogene Mus_musculus 2e-25 122
ENSMUST00000121408 Gm15329-001 unprocessed_pseudogene Mus_musculus 8e-24 117
ENSMUST00000171455 Gm17572-201 processed_pseudogene Mus_musculus 1e-22 113

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