| Transcript ID | Breast |
|---|---|
| ENST00000468872 | 2.274±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000468872  |
LSM5-006 |
ENSG00000106355 |
9606 | - |
7:32487035-32488061  |
retained_intron |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000359 | CIL_000359_0001 | CGP | 7:31751179-32495283 |
| CIL_0003FD | CIL_0003FD_0001 | CGP | 7:32485332-32588721 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000177144
|
Lsm5-003 | nonsense_mediated_decay | Mus_musculus | 8e-37 | 158 |
|
ENSMUST00000175865
|
Lsm5-004 | retained_intron | Mus_musculus | 8e-37 | 158 |
|
ENSMUST00000170382
|
Lsm5-001 | protein_coding | Mus_musculus | 8e-37 | 158 |
|
ENSMUST00000176595
|
Lsm5-002 | processed_transcript | Mus_musculus | 3e-36 | 156 |
|
ENSMUST00000145844
|
Gm7846-001 | processed_pseudogene | Mus_musculus | 3e-31 | 139 |
|
ENSMUST00000174543
|
Gm10074-001 | processed_pseudogene | Mus_musculus | 3e-31 | 139 |
